3Depict: IonStreamData Class Reference

Point with m-t-c value data. More...

#include <filter.h>

Inheritance diagram for IonStreamData:

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Collaboration diagram for IonStreamData:

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Public Member Functions
	IonStreamData ()

	IonStreamData (const Filter *f)

void	clear ()
	Free mem held by objects. More...

void	sample (float fraction)

IonStreamData *	cloneSampled (float fraction) const

size_t	getNumBasicObjects () const

void	estimateIonParameters (const std::vector< const FilterStreamData *> &inputData)
	Use heuristics to guess best display parameters for this ionstream. May attempt to leave them alone. More...

void	estimateIonParameters (const IonStreamData *inputFilter)

Public Member Functions inherited from FilterStreamData
	FilterStreamData ()

	FilterStreamData (const Filter *)

virtual	~FilterStreamData ()

virtual unsigned int	getStreamType () const
	Returns an integer unique to the class to identify type (yes rttid...) More...

Static Public Member Functions
static unsigned int	exportStreams (const std::vector< const FilterStreamData *> &selected, const std::string &outFile, unsigned int format=IONFORMAT_POS)
	export given filterstream data pointers as ion data More...

Public Attributes
float	r

float	g

float	b

float	a

float	ionSize

std::string	valueType
	The name for the type of data – nominally "mass-to-charge". More...

std::vector< IonHit >	data
	Apply filter to input data stream. More...

Public Attributes inherited from FilterStreamData
const Filter *	parent
	Parent filter pointer. More...

unsigned int	cached
	Tells us if the filter has cached this data for later use. More...

Additional Inherited Members
Protected Attributes inherited from FilterStreamData
unsigned int	streamType

Detailed Description

Point with m-t-c value data.

Constructor & Destructor Documentation

◆ IonStreamData() [1/2]

IonStreamData::IonStreamData ( )

References STREAM_TYPE_IONS, and FilterStreamData::streamType.

Referenced by cloneSampled().

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◆ IonStreamData() [2/2]

IonStreamData::IonStreamData ( const Filter * f )

References STREAM_TYPE_IONS, and FilterStreamData::streamType.

Member Function Documentation

◆ clear()

void IonStreamData::clear ( )

virtual

Free mem held by objects.

Implements FilterStreamData.

References data.

Referenced by IonInfoFilter::needsUnrangedData().

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◆ cloneSampled()

IonStreamData * IonStreamData::cloneSampled ( float fraction ) const

References a, b, FilterStreamData::cached, data, g, RandNumGen::genUniformDev(), RandNumGen::initTimer(), ionSize, IonStreamData(), FilterStreamData::parent, r, and valueType.

Referenced by VisController::updateScene().

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◆ estimateIonParameters() [1/2]

void IonStreamData::estimateIonParameters ( const std::vector< const FilterStreamData *> & inputData )

Use heuristics to guess best display parameters for this ionstream. May attempt to leave them alone.

References a, b, g, FilterStreamData::getStreamType(), ionSize, r, STREAM_TYPE_IONS, and valueType.

Referenced by estimateIonParameters(), TransformFilter::refresh(), and SpatialAnalysisFilter::setPropFromBinding().

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◆ estimateIonParameters() [2/2]

void IonStreamData::estimateIonParameters ( const IonStreamData * inputFilter )

References estimateIonParameters().

◆ exportStreams()

unsigned int IonStreamData::exportStreams	(	const std::vector< const FilterStreamData *> &	selected,
		const std::string &	outFile,
		unsigned int	format = `IONFORMAT_POS`
	)

static

export given filterstream data pointers as ion data

References IonHit::appendFile(), ASSERT, data, FilterStreamData::getStreamType(), IONFORMAT_ENUM_END, IONFORMAT_VTK, STREAM_TYPE_IONS, VTK_ASCII, and vtk_write_legacy().

Referenced by MainWindowFrame::OnFileExportFilterVideo(), and MainWindowFrame::OnFileExportIons().

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◆ getNumBasicObjects()

size_t IonStreamData::getNumBasicObjects ( ) const

virtual

Implements FilterStreamData.

References data.

Referenced by ExportPosDialog::OnBtnAddData(), ExportPosDialog::OnTreeFiltersSelChanged(), VoxeliseFilter::refresh(), and SpatialAnalysisFilter::setPropFromBinding().

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◆ sample()

void IonStreamData::sample ( float fraction )

Member Data Documentation

◆ a

float IonStreamData::a

Referenced by cloneSampled(), estimateIonParameters(), IonColourFilter::refresh(), IonClipFilter::refresh(), ExternalProgramFilter::refresh(), TransformFilter::refresh(), IonDownsampleFilter::refresh(), DataLoadFilter::refresh(), ClusterAnalysisFilter::refresh(), DataLoadFilter::setProperty(), SpatialAnalysisFilter::setPropFromBinding(), and VisController::updateScene().

◆ b

float IonStreamData::b

Referenced by cloneSampled(), estimateIonParameters(), ExportPosDialog::OnBtnAddData(), ExportPosDialog::OnTreeFiltersSelChanged(), IonClipFilter::refresh(), IonColourFilter::refresh(), ExternalProgramFilter::refresh(), TransformFilter::refresh(), IonDownsampleFilter::refresh(), DataLoadFilter::refresh(), ClusterAnalysisFilter::refresh(), SpatialAnalysisFilter::refresh(), DataLoadFilter::setProperty(), SpatialAnalysisFilter::setPropFromBinding(), and VisController::updateScene().

◆ data

std::vector<IonHit> IonStreamData::data

Apply filter to input data stream.

Referenced by Filter::buildSplitPoints(), clear(), cloneSampled(), Filter::collateIons(), computeConvexHull(), computeMatrixEntries(), FilterTree::contains(), createMassBackground(), exportStreams(), Filter::getIonstreamIonID(), getNumBasicObjects(), getRectilinearBounds(), IonColourFilter::getRefreshUseMask(), ExternalProgramFilter::getRefreshUseMask(), BoundingBoxFilter::getRefreshUseMask(), IonDownsampleFilter::getRefreshUseMask(), VoxeliseFilter::getRefreshUseMask(), makeFrequencyTable(), SpectrumPlotFilter::needsUnrangedData(), IonInfoFilter::needsUnrangedData(), IonClipFilter::refresh(), IonColourFilter::refresh(), ExternalProgramFilter::refresh(), TransformFilter::refresh(), BoundingBoxFilter::refresh(), SpectrumPlotFilter::refresh(), IonDownsampleFilter::refresh(), RangeFileFilter::refresh(), IonInfoFilter::refresh(), ProfileFilter::refresh(), VoxeliseFilter::refresh(), DataLoadFilter::refresh(), ClusterAnalysisFilter::refresh(), SpatialAnalysisFilter::refresh(), IonClipFilter::setPropFromBinding(), TransformFilter::setPropFromBinding(), ProfileFilter::setPropFromBinding(), ClusterAnalysisFilter::setPropFromBinding(), SpatialAnalysisFilter::setPropFromBinding(), VisController::updateScene(), and RangeFileFilter::writePackageState().

◆ g

float IonStreamData::g

Referenced by cloneSampled(), estimateIonParameters(), ExportPosDialog::OnBtnAddData(), ExportPosDialog::OnTreeFiltersSelChanged(), IonClipFilter::refresh(), IonColourFilter::refresh(), ExternalProgramFilter::refresh(), TransformFilter::refresh(), IonDownsampleFilter::refresh(), DataLoadFilter::refresh(), ClusterAnalysisFilter::refresh(), SpatialAnalysisFilter::refresh(), DataLoadFilter::setProperty(), SpatialAnalysisFilter::setPropFromBinding(), and VisController::updateScene().

◆ ionSize

float IonStreamData::ionSize

Referenced by cloneSampled(), estimateIonParameters(), IonClipFilter::refresh(), ExternalProgramFilter::refresh(), TransformFilter::refresh(), IonDownsampleFilter::refresh(), DataLoadFilter::refresh(), DataLoadFilter::setProperty(), SpatialAnalysisFilter::setPropFromBinding(), and VisController::updateScene().

◆ r

float IonStreamData::r

Referenced by cloneSampled(), estimateIonParameters(), ExportPosDialog::OnBtnAddData(), ExportPosDialog::OnTreeFiltersSelChanged(), IonClipFilter::refresh(), IonColourFilter::refresh(), ExternalProgramFilter::refresh(), TransformFilter::refresh(), IonDownsampleFilter::refresh(), DataLoadFilter::refresh(), ClusterAnalysisFilter::refresh(), SpatialAnalysisFilter::refresh(), DataLoadFilter::setProperty(), SpatialAnalysisFilter::setPropFromBinding(), and VisController::updateScene().

◆ valueType

std::string IonStreamData::valueType

The name for the type of data – nominally "mass-to-charge".

Referenced by cloneSampled(), estimateIonParameters(), TransformFilter::refresh(), SpectrumPlotFilter::refresh(), IonDownsampleFilter::refresh(), DataLoadFilter::refresh(), DataLoadFilter::setProperty(), and SpatialAnalysisFilter::setPropFromBinding().

The documentation for this class was generated from the following files: